A note on making HarmonizePy public, and why we wanted a Python version of HarmonizR's missing-value-aware batch correction.

Release note for QuEStVar v0.1.0. Python package for paired equivalence and difference testing, now stable on PyPI.

The story behind ProteoForge, a framework for finding differential proteoforms in bottom-up proteomics data. Why protein-level averages hide biology, how missing data broke every tool we tried, and what we found when we applied it to a hypoxia dataset.

Probabilistic dropout analysis for label-free proteomics. Handles missing values by modeling dropout curves instead of imputing.